HHsearch alignment for GI: 254781147 and conserved domain: PRK07122

>PRK07122 RNA polymerase sigma factor SigF; Reviewed.

Probab=91.40  E-value=0.25  Score=28.70  Aligned_cols=34  Identities=26%  Similarity=0.308  Sum_probs=29.2

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             9999999983994999999863429999887558
Q gi|254781147|r   24 NNFRNIRKEAKLTQKEIRNRTGFAQSWISELETG   57 (83)
Q Consensus        24 ~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G   57 (83)
T Consensus       220 r~Vi~lry~e~~Tl~EIa~~lGiSreRVrQIe~~  253 (263)
T PRK07122        220 RTVLVLRFFESMTQTQIAERVGISQMHVSRLLAK  253 (263)
T ss_pred             HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf             9999999569998999999989799999999999