HHsearch alignment for GI: 254781147 and conserved domain: PRK10014
>PRK10014 DNA-binding transcriptional repressor MalI; Provisional.
Probab=96.76 E-value=0.0021 Score=41.00 Aligned_cols=47 Identities=19% Similarity=0.177 Sum_probs=38.6
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH---HHHHHHHHCCCH
Q ss_conf 98399499999986342999988755899944899---999999928999
Q gi|254781147|r 31 KEAKLTQKEIRNRTGFAQSWISELETGKSTINIDN---MIILAHTLDTPL 77 (83)
Q Consensus 31 ~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~~---l~~la~al~i~~ 77 (83)
T Consensus 3 ~~kkvTi~dIA~~aGVS~aTVSrvLn~~~~Vs~eTr~rV~~aa~elgY~p 52 (342)
T PRK10014 3 TAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNQAIEELGFVR 52 (342)
T ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 99988799999998969999999977989999999999999999948997