HHsearch alignment for GI: 254781147 and conserved domain: PRK10344

>PRK10344 DNA-binding transcriptional regulator Nlp; Provisional.
Probab=93.69  E-value=0.28  Score=28.43  Aligned_cols=55  Identities=15%  Similarity=0.194  Sum_probs=43.3

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHC
Q ss_conf             9999999983994999999863429999887558999448999999999289999960
Q gi|254781147|r   24 NNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAHTLDTPLWKLL   81 (83)
Q Consensus        24 ~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~~l~~la~al~i~~~~l~   81 (83)
T Consensus        11 ADIiAAL~KrG~sLa~Lsr~aGls~sTL~nAL~r-pwPKgE--~iIA~aLGv~P~eIW   65 (90)
T PRK10344         11 ADIIAGLRKKGTSMAAESRRNGLSSSTLANALSR-PWPKGE--MIIAKALGTDPWVIW   65 (90)
T ss_pred             HHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCC-CCCHHH--HHHHHHHCCCHHHCC
T ss_conf             9999999986886999999909986889998748-995679--999999787988809