HHsearch alignment for GI: 254781147 and conserved domain: PRK10423
>PRK10423 transcriptional repressor RbsR; Provisional.
Probab=94.30 E-value=0.074 Score=31.85 Aligned_cols=42 Identities=12% Similarity=0.071 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCHHH---HHHHHHHHCCCHH
Q ss_conf 99999986342999988755899944899---9999999289999
Q gi|254781147|r 37 QKEIRNRTGFAQSWISELETGKSTINIDN---MIILAHTLDTPLW 78 (83)
Q Consensus 37 q~ela~~~gis~~~is~iE~G~~~~~~~~---l~~la~al~i~~~ 78 (83)
T Consensus 1 ikDIA~~AGVS~sTVSrvLn~~~~Vs~~tr~rV~~aa~elgY~pn 45 (327)
T PRK10423 1 MKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPS 45 (327)
T ss_pred CHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 968987869899999999789599999999999999998299868