HHsearch alignment for GI: 254781147 and conserved domain: PRK13890
>PRK13890 conjugal transfer protein TrbA; Provisional.
Probab=99.57 E-value=7.9e-15 Score=108.85 Aligned_cols=64 Identities=36% Similarity=0.559 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCC
Q ss_conf 9999999999999839949999998634299998875589994489999999992899999608
Q gi|254781147|r 19 RMIFVNNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAHTLDTPLWKLLK 82 (83)
Q Consensus 19 ~~~~g~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~~l~~la~al~i~~~~l~~ 82 (83)
T Consensus 3 n~ifftNv~RLr~ErGmT~~eLAe~AGIS~s~LSqIE~Gk~NPSL~tLe~IA~AL~VPL~~Lle 66 (119)
T PRK13890 3 NYIFFTNVLRLLDERHMTKKELSDRSGVSISFLSDLTTGKANPSLKVMEDIAQALETPLPLLLE 66 (119)
T ss_pred CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHH
T ss_conf 3145887999999859979999988298899999997799898799999999998797799876