HHsearch alignment for GI: 254781147 and conserved domain: TIGR00721

>TIGR00721 tfx DNA-binding protein, Tfx family; InterPro: IPR004645 This is a family of Tfx DNA-binding proteins, which is restricted to the archaea. Homology among the members is strongest in the helix-turn-helix-containing N-terminal region. Tfx from Methanobacterium thermoautotrophicum is associated with the operon for molybdenum formyl-methanofuran dehydrogenase and binds a DNA sequence near its promoter.; GO: 0003677 DNA binding.
Probab=93.86  E-value=0.034  Score=33.89  Aligned_cols=28  Identities=29%  Similarity=0.274  Sum_probs=25.5

Q ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             9839949999998634299998875589
Q gi|254781147|r   31 KEAKLTQKEIRNRTGFAQSWISELETGK   58 (83)
Q Consensus        31 ~~~gltq~ela~~~gis~~~is~iE~G~   58 (83)
T Consensus        18 R~kGl~Q~eIAk~LkTtRaNvS~iEkrA   45 (142)
T TIGR00721        18 REKGLKQKEIAKILKTTRANVSIIEKRA   45 (142)
T ss_pred             HHCCCCHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             6338887889877267201378988874