HHsearch alignment for GI: 254781147 and conserved domain: TIGR02612
>TIGR02612 mob_myst_A mobile mystery protein A; InterPro: IPR013435 Proteins in this entry are more often encoded within mobilisation-related contexts than not. This includes a CRISPR-associated gene region in Geobacter sulfurreducens PCA, and plasmids in Agrobacterium tumefaciens and Coxiella burnetii. They are found together with mobile mystery protein B, a member of the Fic protein family (IPR003812 from INTERPRO). Mobile mystery protein A is encoded by the upstream member of the gene pair and contains a helix-turn-helix domain..
Probab=98.52 E-value=6.6e-08 Score=67.76 Aligned_cols=59 Identities=19% Similarity=0.319 Sum_probs=55.5
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC--CCCHHHHHHHHHHHCCCHHHHCCC
Q ss_conf 99999998399499999986342999988755899--944899999999928999996088
Q gi|254781147|r 25 NFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKS--TINIDNMIILAHTLDTPLWKLLKP 83 (83)
Q Consensus 25 ~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~--~~~~~~l~~la~al~i~~~~l~~P 83 (83)
T Consensus 29 WvR~~R~ALGms~~QLA~RlGV~p~Rv~~~E~~E~~G~VTL~tlr~aAEAl~C~FVYafVP 89 (150)
T TIGR02612 29 WVRAIRKALGMSGAQLAARLGVTPQRVEAIEKSELSGAVTLKTLRKAAEALDCTFVYAFVP 89 (150)
T ss_pred CHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCC
T ss_conf 1688987725157887665289737799988887555355888999999859844340188