HHsearch alignment for GI: 254781147 and conserved domain: pfam01371
>pfam01371 Trp_repressor Trp repressor protein. This protein binds to tryptophan and represses transcription of the Trp operon.
Probab=94.26 E-value=0.098 Score=31.12 Aligned_cols=40 Identities=23% Similarity=0.294 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999--98399499999986342999988755
Q gi|254781147|r 17 RERMIFVNNFRNIR--KEAKLTQKEIRNRTGFAQSWISELET 56 (83)
Q Consensus 17 ~~~~~~g~~ir~~R--~~~gltq~ela~~~gis~~~is~iE~ 56 (83)
T Consensus 30 ~E~~ala~R~~va~~LL~~~~syreI~~~~g~S~aTItRvsr 71 (88)
T pfam01371 30 DEREALAQRLRIAKELLRGELSQREIAQELGASIATITRGSN 71 (88)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 999999999999999997899899999985985231478899