HHsearch alignment for GI: 254781147 and conserved domain: pfam08667

>pfam08667 BetR BetR domain. This family includes an N-terminal helix-turn-helix domain.

Probab=96.98  E-value=0.005  Score=38.80  Aligned_cols=64  Identities=19%  Similarity=0.241  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCC
Q ss_conf             99999999999998399499----99998634299998875589994489999999992899999608
Q gi|254781147|r   19 RMIFVNNFRNIRKEAKLTQK----EIRNRTGFAQSWISELETGKSTINIDNMIILAHTLDTPLWKLLK   82 (83)
Q Consensus        19 ~~~~g~~ir~~R~~~gltq~----ela~~~gis~~~is~iE~G~~~~~~~~l~~la~al~i~~~~l~~   82 (83)
T Consensus         3 ~~~ia~rvr~lL~r~GI~kRqh~s~is~iL~LSfS~a~RKLkG~spW~l~Ql~kVA~~fg~~~a~L~~   70 (146)
T pfam08667         3 DLIVAERVRKLLTRTGIAERQHNTTIANILGLSFSQAYRKLKGSIPWNLAQLQKVAQYFGVPAAILLI   70 (146)
T ss_pred             CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHC
T ss_conf             18999999999986399756778899999787489887873589974499999999995979999927