HHsearch results for GI: 254781147 and protein with PDBid: 1neq_A
>1neq_A DNA-binding protein NER; NMR {Enterobacteria phage MU} SCOP: a.35.1.2 PDB: 1ner_A
Probab=96.31 E-value=0.011 Score=35.38 Aligned_cols=56 Identities=16% Similarity=0.119 Sum_probs=46.0
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCC
Q ss_conf 99999999839949999998634299998875589994489999999992899999608
Q gi|254781147|r 24 NNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAHTLDTPLWKLLK 82 (83)
Q Consensus 24 ~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~~l~~la~al~i~~~~l~~ 82 (83)
..|+..-..+|+|..+||...|++.++++..-. .|....=..||++||+++.+++-
T Consensus 12 adI~AaL~krG~sLa~lsr~~Gls~~tl~nal~---rp~pkgEriIA~aLGv~P~eIWP 67 (74)
T 1neq_A 12 ADVIAGLKKRKLSLSALSRQFGYAPTTLANALE---RHWPKGEQIIANALETKPEVIWP 67 (74)
T ss_dssp HHHHHHHHTTSCCHHHHHHHHSSCHHHHHHTTT---SSCHHHHHHHHHHTTSCHHHHCT
T ss_pred HHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHC---CCCCHHHHHHHHHHCCCHHHHCC
T ss_conf 999999999689699999990998899999882---77807999999997859889496