HHSEARCH alignment of GI: 254781147 and SCOP domain: d1lmb3_

Alignment
>d1lmb3_ a.35.1.2 (3:) lambda C1 repressor, DNA-binding domain {Bacteriophage lambda [TaxId: 10710]}
Probab=99.51  E-value=2.4e-14  Score=103.24  Aligned_cols=72  Identities=21%  Similarity=0.310  Sum_probs=66.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCC
Q ss_conf             898999999999999999999839949999998634299998875589994489999999992899999608
Q gi|254781147|r   11 LSDAILRERMIFVNNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAHTLDTPLWKLLK   82 (83)
Q Consensus        11 ~~~~~~~~~~~~g~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~~l~~la~al~i~~~~l~~   82 (83)
                      +++........++..++.+|+++||||++||+.+|+|+++|++||+|...|+++++.+||++|++++.+||.
T Consensus         2 ~t~~~~~~~~~l~~~i~~~R~~~gltq~~lA~~lgis~~~is~~E~g~~~~s~~~l~~ia~~l~v~~~~~~~   73 (87)
T d1lmb3_           2 LTQEQLEDARRLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINALNAYNAALLAKILKVSVEEFSP   73 (87)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTSCGGGTCH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCH
T ss_conf             498999999999999999999939999999988672288899998114787599999999998979999874


SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: Phage repressors
domain: lambda C1 repressor, DNA-binding domain
species: Bacteriophage lambda [TaxId: 10710]