HHSEARCH alignment of GI: 254781147 and SCOP domain: d1vz0a1

Alignment

Probab=93.18  E-value=0.051  Score=30.11  Aligned_cols=31  Identities=29%  Similarity=0.440  Sum_probs=25.8

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999983994999999863429999887
Q gi|254781147|r   23 VNNFRNIRKEAKLTQKEIRNRTGFAQSWISEL   54 (83)
Q Consensus        23 g~~ir~~R~~~gltq~ela~~~gis~~~is~i   54 (83)
                      +.-++.+. +.|+|++++|+++|.|+++|++.
T Consensus         9 A~a~~~L~-e~g~t~~~iA~~~Gks~~~V~~~   39 (93)
T d1vz0a1           9 ARGYQALL-EMGLTQEEVARRVGKARSTVANA   39 (93)
T ss_dssp             HHHHHHHH-HTTCCHHHHHHHHTCCHHHHHHH
T ss_pred             HHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHH
T ss_conf             99999999-84999999999985146999999

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: KorB DNA-binding domain-like
family: KorB DNA-binding domain-like
domain: Putative partitioning protein ParB/Spo0J
species: Thermus thermophilus [TaxId: 274]