HHSEARCH alignment of GI: 254781147 and SCOP domain: d2auwa1

Alignment

Probab=98.63  E-value=1.7e-08  Score=68.58  Aligned_cols=44  Identities=14%  Similarity=0.126  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf             99999999983994999999863429999887558999448999
Q gi|254781147|r   23 VNNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNM   66 (83)
Q Consensus        23 g~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~~l   66 (83)
                      ++.|+.+|++.||||+++|+.+|||+++|++||+|++.++....
T Consensus         3 ~e~~k~~R~~~gltQ~elA~~LGvs~~ti~~yE~G~r~iP~~v~   46 (67)
T d2auwa1           3 HEMFGDWMHRNNLSLTTAAEALGISRRMVSYYRTAHKIIPRTIW   46 (67)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHH
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHH
T ss_conf             89999999995999999999959989999999869999998999

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: NE0471 C-terminal domain-like
domain: Hypothetical protein NE0471 C-terminal domain
species: Nitrosomonas europaea [TaxId: 915]