HHSEARCH alignment of GI: 254781147 and SCOP domain: d2croa_

Alignment

Probab=99.40  E-value=2.5e-13  Score=97.27  Aligned_cols=61  Identities=21%  Similarity=0.240  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCC
Q ss_conf             99999999999839949999998634299998875589994489999999992899999608
Q gi|254781147|r   21 IFVNNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAHTLDTPLWKLLK   82 (83)
Q Consensus        21 ~~g~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~~l~~la~al~i~~~~l~~   82 (83)
                      .||.+|+.+|+++||||+|||+.+|+++++|++||+|+..|+ +++.+||++|||++++|+.
T Consensus         3 ~i~~rlr~~R~~~gltq~~lA~~~gvs~~ti~~~E~g~~~~~-~~l~~ia~~l~v~~~~Ll~   63 (65)
T d2croa_           3 TLSERLKKRRIALKMTQTELATKAGVKQQSIQLIEAGVTKRP-RFLFEIAMALNCDPVWLQY   63 (65)
T ss_dssp             SHHHHHHHHHHHTTCCHHHHHHHHTSCHHHHHHHHTTCCSSC-TTHHHHHHHTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCH-HHHHHHHHHHCCCHHHHHH
T ss_conf             899999999998499999999997867949998787799999-9999999996998999833

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: Phage repressors
domain: cro 434
species: Bacteriophage 434 [TaxId: 10712]