HHSEARCH alignment of GI: 254781147 and SCOP domain: d2hsga1

Alignment

Probab=96.35  E-value=0.0027  Score=37.65  Aligned_cols=43  Identities=9%  Similarity=0.150  Sum_probs=35.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH---HHHHCCC
Q ss_conf             994999999863429999887558999448999999---9992899
Q gi|254781147|r   34 KLTQKEIRNRTGFAQSWISELETGKSTINIDNMIIL---AHTLDTP   76 (83)
Q Consensus        34 gltq~ela~~~gis~~~is~iE~G~~~~~~~~l~~l---a~al~i~   76 (83)
                      +.|..|+|+.+|+|.+++|++-||...++-++-.++   ++.||..
T Consensus         1 NvTi~dvA~~agvS~~TVSr~Ln~~~~Vs~~tr~rV~~aa~~lgY~   46 (57)
T d2hsga1           1 NVTIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYR   46 (57)
T ss_dssp             CCCHHHHHHHTTSCHHHHHHHHTTCTTSCHHHHHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             9699999989895999999996898867989999999999998869

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: GalR/LacI-like bacterial regulator
domain: Glucose-resistance amylase regulator CcpA, N-terminal domain
species: Bacillus megaterium [TaxId: 1404]