PSIBLAST alignment of GI: 254781147 and protein with PDB id: 1y9q

>gi|60594530|pdb|1Y9Q|A Chain A, Crystal Structure Of Hth_3 Family Transcriptional Regulator From Vibrio Cholerae Length = 192
 Score = 49.9 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 28/63 (44%)

Query: 19 RMIFVNNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAHTLDTPLW 78
          +    N  +N+RK   L+       TG +++ + ++E G+S+  I  +  +A  L+    
Sbjct: 9  KSQIANQLKNLRKSRGLSLDATAQLTGVSKAXLGQIERGESSPTIATLWKIASGLEASFS 68

Query: 79 KLL 81
             
Sbjct: 69 AFF 71