RPSBLAST alignment of GI: 254781147 and SCOP domain: d1y9qa1

Alignment

>d1y9qa1 a.35.1.8 (A:4-82) Probable transcriptional regulator VC1968, N-terminal domain {Vibrio cholerae [TaxId: 666]} Length = 79

 Score = 44.9 bits (106), Expect = 2e-06
 Identities = 14/72 (19%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 12 SDAILRERMIFVNNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAH 71
          +D + + +    N  +N+RK   L+       TG +++ + ++E G+S+  I  +  +A 
Sbjct: 1  TDVMFKSQ--IANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIAS 58

Query: 72 TLDTPLWKLLKP 83
           L+         
Sbjct: 59 GLEASFSAFFAN 70

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: Probable transcriptional regulator VC1968, N-terminal domain
domain: Probable transcriptional regulator VC1968, N-terminal domain
species: Vibrio cholerae [TaxId: 666]