HHsearch alignment for GI: 254781149 and conserved domain: COG1066

Probab=99.28  E-value=6.8e-11  Score=96.18  Aligned_cols=123  Identities=27%  Similarity=0.366  Sum_probs=92.4

Q ss_pred             CCCCCCHHHHHHHHH-HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf             678511137777765-5301683688706874148899999999963022323641167534899999999630223234
Q gi|254781149|r  122 NPDIKWGLQSVDHLM-GGVQLRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSNLLYPSSSR  200 (266)
Q Consensus       122 ~~Gi~TG~~~LD~~~-gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~  200 (266)
T Consensus        72 ~~Ri~tg~~EldRVLGGG~V~Gs~iLIgGdPGIGKSTLLLQva~~lA~~~-~vLYVsGEES~~QiklRA~--RL-----~  143 (456)
T COG1066          72 EPRISTGIEELDRVLGGGLVPGSVILIGGDPGIGKSTLLLQVAARLAKRG-KVLYVSGEESLQQIKLRAD--RL-----G  143 (456)
T ss_pred             CCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHH--HH-----C
T ss_conf             24235781888765367723661799736898779899999999987059-5799967767899999999--82-----8


Q ss_pred             CCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEC-----------CCCCCHHHHHHHHHHHHHHH
Q ss_conf             78555017889989999999999999729954747-----------99889899999999999994
Q gi|254781149|r  201 IPYLNLIRGEINQEQYRISQGICEKLQDFPLIIDD-----------RPSPGIMEFVHVANGLRNKH  255 (266)
Q Consensus       201 I~~~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD-----------~~~~ti~~ira~aR~~k~k~  255 (266)
T Consensus       144 ~~~~~l~--l~aEt~~e~I~~~l~~~-~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~A  206 (456)
T COG1066         144 LPTNNLY--LLAETNLEDIIAELEQE-KPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLA  206 (456)
T ss_pred             CCCCCEE--EEHHCCHHHHHHHHHHC-CCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             9964557--74112899999999854-997899965412302633579985899999999999999