HHsearch alignment for GI: 254781149 and conserved domain: COG1131
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms].
Probab=95.03 E-value=0.13 Score=31.38 Aligned_cols=126 Identities=17% Similarity=0.036 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHC-------CC-----------CEEEE------CCCCCHHH
Q ss_conf 37777765530168368870687414889999999996302-------23-----------23641------16753489
Q gi|254781149|r 129 LQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAMS-------GH-----------GVAFF------SLEMDREK 184 (266)
Q Consensus 129 ~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~-------g~-----------~Vl~f------SlEMs~~q 184 (266)
T Consensus 18 ~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~Gl~~p~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lTv~e 97 (293)
T COG1131 18 KTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELTVRE 97 (293)
T ss_pred CEEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCEEEEEECCCCCCCCCCHHH
T ss_conf 78886049998289599998999998999999996797788649999586275126765052999947877771475999
Q ss_pred HHHHHHHHHHCCC-------------CCCCCHH-HCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCC-----CHHHHH
Q ss_conf 9999999630223-------------2347855-50178899899999999999997299547479988-----989999
Q gi|254781149|r 185 LGARALSNLLYPS-------------SSRIPYL-NLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSP-----GIMEFV 245 (266)
Q Consensus 185 l~~R~ls~~t~~~-------------~s~I~~~-~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~-----ti~~ir 245 (266)
T Consensus 98 ~l~~~~~-l~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~ 176 (293)
T COG1131 98 NLEFFAR-LYGLSKEEAEERIEELLELFGLEDKANKKVRTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIW 176 (293)
T ss_pred HHHHHHH-HHCCCHHHHHHHHHHHHHHCCCCCHHCCCHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
T ss_conf 9999999-849971667999999999869960328810237988999999999996699999996997787999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999994
Q gi|254781149|r 246 HVANGLRNKH 255 (266)
Q Consensus 246 a~aR~~k~k~ 255 (266)
T Consensus 177 ~~l~~l~~~g 186 (293)
T COG1131 177 ELLRELAKEG 186 (293)
T ss_pred HHHHHHHHCC
T ss_conf 9999999679