HHsearch alignment for GI: 254781149 and conserved domain: COG1132
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].
Probab=91.99 E-value=0.9 Score=25.58 Aligned_cols=120 Identities=14% Similarity=0.127 Sum_probs=72.8
Q ss_pred CCCCHHH----HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH-C------CC---------------------
Q ss_conf 8511137----77776553016836887068741488999999999630-2------23---------------------
Q gi|254781149|r 124 DIKWGLQ----SVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAM-S------GH--------------------- 171 (266)
Q Consensus 124 Gi~TG~~----~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~-~------g~--------------------- 171 (266)
T Consensus 333 ~v~f~y~~~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~i~~V~Qd~ 412 (567)
T COG1132 333 NVSFSYPGKKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQDP 412 (567)
T ss_pred EEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCC
T ss_conf 87897599876110522775489878885588885789999998615888836989999777538567887823546642
Q ss_pred ---------CEEEECCCCCHHHHHHHHHHHHHCCCCCCCCH-HHC---CCC-CCCHHHHHHHHHHHHHHHHCCCEEECCC
Q ss_conf ---------23641167534899999999630223234785-550---178-8998999999999999972995474799
Q gi|254781149|r 172 ---------GVAFFSLEMDREKLGARALSNLLYPSSSRIPY-LNL---IRG-EINQEQYRISQGICEKLQDFPLIIDDRP 237 (266)
Q Consensus 172 ---------~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~-~~l---~~g-~l~~~e~~~i~~a~~~l~~~pl~IdD~~ 237 (266)
T Consensus 413 ~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQriaiARall~~~~iLILDEa 492 (567)
T COG1132 413 LLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILDEA 492 (567)
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCH
T ss_conf 77776699997457889999999999999486378984766678360578871889999999999997036986887231
Q ss_pred CCCHHH
Q ss_conf 889899
Q gi|254781149|r 238 SPGIME 243 (266)
Q Consensus 238 ~~ti~~ 243 (266)
T Consensus 493 TS~lD~ 498 (567)
T COG1132 493 TSALDT 498 (567)
T ss_pred HHCCCH
T ss_conf 102677