HHsearch alignment for GI: 254781149 and conserved domain: COG1474
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=93.98 E-value=0.59 Score=26.90 Aligned_cols=94 Identities=19% Similarity=0.211 Sum_probs=57.0
Q ss_pred HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHC--CCCEEEE-CCCCC-HHHHHHHHHHHHHCCCCCCCCHHHCC
Q ss_conf 77765530168368870687414889999999996302--2323641-16753-48999999996302232347855501
Q gi|254781149|r 132 VDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAMS--GHGVAFF-SLEMD-REKLGARALSNLLYPSSSRIPYLNLI 207 (266)
Q Consensus 132 LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~--g~~Vl~f-SlEMs-~~ql~~R~ls~~t~~~~s~I~~~~l~ 207 (266)
T Consensus 33 l~~~~~~~~p~n-~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~~t~~~i~~~i~~~~~-----~~p~~--- 103 (366)
T COG1474 33 LAPALRGERPSN-IIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLELRTPYQVLSKILNKLG-----KVPLT--- 103 (366)
T ss_pred HHHHHCCCCCCC-EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHC-----CCCCC---
T ss_conf 999855899860-799889998732899999999973315675799951307878799999999826-----89976---
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEC
Q ss_conf 7889989999999999999729954747
Q gi|254781149|r 208 RGEINQEQYRISQGICEKLQDFPLIIDD 235 (266)
Q Consensus 208 ~g~l~~~e~~~i~~a~~~l~~~pl~IdD 235 (266)
T Consensus 104 -g~~~~~~~~~l~~~~~~~~~~~IvvLD 130 (366)
T COG1474 104 -GDSSLEILKRLYDNLSKKGKTVIVILD 130 (366)
T ss_pred -CCCHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf -763268999999977741875999976