HHsearch alignment for GI: 254781149 and conserved domain: COG3854

>COG3854 SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown].
Probab=91.73  E-value=0.25  Score=29.45  Aligned_cols=39  Identities=28%  Similarity=0.227  Sum_probs=31.0

Q ss_pred             HCCCCE-EEEECCCCHHHHHHHHHHHHHHHHC-----CCCEEEEC
Q ss_conf             016836-8870687414889999999996302-----23236411
Q gi|254781149|r  139 VQLREL-ILIGARPSMGKTTFALSTALHMAMS-----GHGVAFFS  177 (266)
Q Consensus       139 ~~~g~L-iviaaRP~mGKTa~alnia~~~a~~-----g~~Vl~fS  177 (266)
T Consensus       133 y~~g~lntLiigpP~~GKTTlLRdiaR~~s~g~~~~l~kkv~IiD  177 (308)
T COG3854         133 YQNGWLNTLIIGPPQVGKTTLLRDIARLLSDGINQFLPKKVGIID  177 (308)
T ss_pred             HHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEE
T ss_conf             843722469965998870779999999863151126773289971