HHsearch alignment for GI: 254781149 and conserved domain: COG3854
>COG3854 SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown].
Probab=91.73 E-value=0.25 Score=29.45 Aligned_cols=39 Identities=28% Similarity=0.227 Sum_probs=31.0
Q ss_pred HCCCCE-EEEECCCCHHHHHHHHHHHHHHHHC-----CCCEEEEC
Q ss_conf 016836-8870687414889999999996302-----23236411
Q gi|254781149|r 139 VQLREL-ILIGARPSMGKTTFALSTALHMAMS-----GHGVAFFS 177 (266)
Q Consensus 139 ~~~g~L-iviaaRP~mGKTa~alnia~~~a~~-----g~~Vl~fS 177 (266)
T Consensus 133 y~~g~lntLiigpP~~GKTTlLRdiaR~~s~g~~~~l~kkv~IiD 177 (308)
T COG3854 133 YQNGWLNTLIIGPPQVGKTTLLRDIARLLSDGINQFLPKKVGIID 177 (308)
T ss_pred HHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEE
T ss_conf 843722469965998870779999999863151126773289971