HHsearch alignment for GI: 254781149 and conserved domain: PRK00889

Probab=94.89  E-value=0.25  Score=29.47  Aligned_cols=93  Identities=16%  Similarity=0.125  Sum_probs=53.2

Q ss_pred             HCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCH----H
Q ss_conf             016836887068741488999999999630223236411675348999999996302232347855501788998----9
Q gi|254781149|r  139 VQLRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLIRGEINQ----E  214 (266)
Q Consensus       139 ~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~----~  214 (266)
T Consensus         1 ~~kg~viWltGlsgSGKTTia~~l~~~L~~~~~~~~~LD----GD~lR~-~l~~-------~l--------gfs~~dR~~   60 (175)
T PRK00889          1 MQRGVTVWFTGLSGAGKTTISHALAEKLRARGYPVEVLD----GDIVRT-NLSK-------GL--------GFSKEDRDT   60 (175)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEC----CHHHHH-HHCC-------CC--------CCCHHHHHH
T ss_conf             998889998898999999999999999998699679977----688887-5367-------88--------989899999


Q ss_pred             HHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHH
Q ss_conf             9999999999997299547479988989999999999
Q gi|254781149|r  215 QYRISQGICEKLQDFPLIIDDRPSPGIMEFVHVANGL  251 (266)
Q Consensus       215 e~~~i~~a~~~l~~~pl~IdD~~~~ti~~ira~aR~~  251 (266)
T Consensus        61 n~~r~~~la~~l~~~g~~vIvs~isp~~~~R~~~r~~   97 (175)
T PRK00889         61 NIRRIGFVAHLLTRHGVIVLVSAISPYRETREEVRGT   97 (175)
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH
T ss_conf             9999999999998189868885047999999999985