HHsearch alignment for GI: 254781149 and conserved domain: PRK06067
>PRK06067 flagellar accessory protein FlaH; Validated.
Probab=99.33 E-value=1.8e-11 Score=100.19 Aligned_cols=69 Identities=20% Similarity=0.215 Sum_probs=65.5
Q ss_pred CCCCHHHHHHHHH-HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 8511137777765-53016836887068741488999999999630223236411675348999999996
Q gi|254781149|r 124 DIKWGLQSVDHLM-GGVQLRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSN 192 (266)
Q Consensus 124 Gi~TG~~~LD~~~-gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~ 192 (266)
T Consensus 13 ~i~tGi~~lD~~l~GG~p~g~~~li~G~~G~GKt~~~~~f~~~~~~~g~~~~~~~~ee~~~~~~~~~~~~ 82 (241)
T PRK06067 13 IISTGNEEIDRKLGGGIPFGSLILIEGENDTGKSVLSQQFVWGALNQGKRGLAITTENTSKSYLKQMESL 82 (241)
T ss_pred CCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHC
T ss_conf 2566875578650699779908999807998879999999999986798299999428999999999983