HHsearch alignment for GI: 254781149 and conserved domain: PRK06835

>PRK06835 DNA replication protein DnaC; Validated.
Probab=95.97  E-value=0.0094  Score=39.42  Aligned_cols=105  Identities=14%  Similarity=0.108  Sum_probs=65.3

Q ss_pred             HHHC-CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCC---------CCC---H
Q ss_conf             5301-68368870687414889999999996302232364116753489999999963022323---------478---5
Q gi|254781149|r  137 GGVQ-LRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSNLLYPSSS---------RIP---Y  203 (266)
Q Consensus       137 gG~~-~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s---------~I~---~  203 (266)
T Consensus       177 ~~F~~~~~nLlf~G~~G~GKTfLa~~IA~ell~~g~sViy~t----a~~L~~~l~~~~~~~~~~~~~~~~~l~~~DLLII  252 (330)
T PRK06835        177 KNFDKNNENLLFYGNTGTGKTFLSNCIAKELLDRGKTVIYRT----SDELIENLREIRFNNDNDAPELEDLLINCDLLII  252 (330)
T ss_pred             HHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE----HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEE
T ss_conf             724788886698899999889999999999998799499962----9999999999754576448999999961898997


Q ss_pred             HHCCCCCCCHHHHHHHHHHHH-HH-HHCCCEEECCCCCCHHHHHHH
Q ss_conf             550178899899999999999-99-729954747998898999999
Q gi|254781149|r  204 LNLIRGEINQEQYRISQGICE-KL-QDFPLIIDDRPSPGIMEFVHV  247 (266)
Q Consensus       204 ~~l~~g~l~~~e~~~i~~a~~-~l-~~~pl~IdD~~~~ti~~ira~  247 (266)
T Consensus       253 DDLG~E~~t~~~~~~Lf~iIN~R~~~~k~tII--TTNl~~~eL~~~  296 (330)
T PRK06835        253 DDLGTESITEFSKTELFNLINKRLLMNKKMII--STNLSLEELLKT  296 (330)
T ss_pred             ECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE--ECCCCHHHHHHH
T ss_conf             21034558868999999999999867999799--889998999998