HHsearch alignment for GI: 254781149 and conserved domain: PRK06835
>PRK06835 DNA replication protein DnaC; Validated.
Probab=95.97 E-value=0.0094 Score=39.42 Aligned_cols=105 Identities=14% Similarity=0.108 Sum_probs=65.3
Q ss_pred HHHC-CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCC---------CCC---H
Q ss_conf 5301-68368870687414889999999996302232364116753489999999963022323---------478---5
Q gi|254781149|r 137 GGVQ-LRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSNLLYPSSS---------RIP---Y 203 (266)
Q Consensus 137 gG~~-~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s---------~I~---~ 203 (266)
T Consensus 177 ~~F~~~~~nLlf~G~~G~GKTfLa~~IA~ell~~g~sViy~t----a~~L~~~l~~~~~~~~~~~~~~~~~l~~~DLLII 252 (330)
T PRK06835 177 KNFDKNNENLLFYGNTGTGKTFLSNCIAKELLDRGKTVIYRT----SDELIENLREIRFNNDNDAPELEDLLINCDLLII 252 (330)
T ss_pred HHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE----HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEE
T ss_conf 724788886698899999889999999999998799499962----9999999999754576448999999961898997
Q ss_pred HHCCCCCCCHHHHHHHHHHHH-HH-HHCCCEEECCCCCCHHHHHHH
Q ss_conf 550178899899999999999-99-729954747998898999999
Q gi|254781149|r 204 LNLIRGEINQEQYRISQGICE-KL-QDFPLIIDDRPSPGIMEFVHV 247 (266)
Q Consensus 204 ~~l~~g~l~~~e~~~i~~a~~-~l-~~~pl~IdD~~~~ti~~ira~ 247 (266)
T Consensus 253 DDLG~E~~t~~~~~~Lf~iIN~R~~~~k~tII--TTNl~~~eL~~~ 296 (330)
T PRK06835 253 DDLGTESITEFSKTELFNLINKRLLMNKKMII--STNLSLEELLKT 296 (330)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE--ECCCCHHHHHHH
T ss_conf 21034558868999999999999867999799--889998999998