HHsearch alignment for GI: 254781149 and conserved domain: PRK06936

>PRK06936 type III secretion system ATPase; Provisional.
Probab=90.43  E-value=0.16  Score=30.76  Aligned_cols=44  Identities=20%  Similarity=0.192  Sum_probs=34.7

Q ss_pred             CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf             851113777776553016836887068741488999999999630
Q gi|254781149|r  124 DIKWGLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAM  168 (266)
Q Consensus       124 Gi~TG~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~  168 (266)
T Consensus       145 pl~TGIraID~llt-~g~GQR~gIfagsGvGKs~Ll~~i~r~~~a  188 (439)
T PRK06936        145 PLSLGVRVIDGLLT-CGEGQRMGIFAAAGGGKSTLLASLIRSAEV  188 (439)
T ss_pred             CCCCCCEEEECCCC-HHCCCEEECCCCCCCCHHHHHHHHHHHHCC
T ss_conf             42268555524686-310570102369999889999999764326