HHsearch alignment for GI: 254781149 and conserved domain: PRK07960
>PRK07960 fliI flagellum-specific ATP synthase; Validated.
Probab=91.71 E-value=0.17 Score=30.68 Aligned_cols=58 Identities=17% Similarity=0.068 Sum_probs=40.9
Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCH
Q ss_conf 785111377777655301683688706874148899999999963022323641167534
Q gi|254781149|r 123 PDIKWGLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDR 182 (266)
Q Consensus 123 ~Gi~TG~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~ 182 (266)
T Consensus 157 epL~TGIraID~llp-igrGQRigIfagsGvGKs~Ll~~iar~~~a-dv~Vi~lIGERgr 214 (455)
T PRK07960 157 HVLDTGVRAINALLT-VGRGQRMGLFAGSGVGKSVLLGMMARYTRA-DVIVVGLIGERGR 214 (455)
T ss_pred CCCCCCCEEEECCCC-CCCCCEEECCCCCCCCHHHHHHHHHHHHCC-CEEEEEEECEEHH
T ss_conf 723268444403367-147877632489988499999999886089-8589972040628