HHsearch alignment for GI: 254781149 and conserved domain: PRK08006
>PRK08006 replicative DNA helicase; Provisional.
Probab=100.00 E-value=0 Score=389.60 Aligned_cols=244 Identities=23% Similarity=0.280 Sum_probs=206.9
Q ss_pred HHHHHHHH---CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHH
Q ss_conf 89898630---0577856899999840676368999999999999999999999999999851144-4234545899999
Q gi|254781149|r 4 EIISHFES---QTKISFSTYLNNLLTLASSISSEVINAARRVVQQWARITISQEAKALALHTSDPT-CNTATLIRKSMQS 79 (266)
Q Consensus 4 ~~~~~le~---~~~i~~~~YL~~L~~~~~s~~~~~~~ya~~i~e~~~rR~l~~~~~~~~~~~~~~~-~~~~~~~~~~e~~ 79 (266)
T Consensus 86 tv~~~L~~~g~l~~iGG~~yL~~L~~~~ps-~an~~~Ya~iVkeks~~R~li~~a~~i~~~~~d~~~~~~~~~ld~ae~~ 164 (471)
T PRK08006 86 TLAESLERQGQLDSVGGFAYLAELSKNTPS-AANISAYADIVRERAVVREMISVANEIADAGYDPQGRTSEDLLDLAESR 164 (471)
T ss_pred HHHHHHHHCCCHHHCCCHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 999999756971422779999999971998-8899999999998678999999988999862187788899999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH--CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHH
Q ss_conf 99999654431046655430116899999999999863--0366678511137777765530168368870687414889
Q gi|254781149|r 80 FEDIISEVHLTKNQCTGSSCISIANAATTAMKSAEQQK--KEGENPDIKWGLQSVDHLMGGVQLRELILIGARPSMGKTT 157 (266)
Q Consensus 80 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Gi~TG~~~LD~~~gG~~~g~LiviaaRP~mGKTa 157 (266)
T Consensus 165 i~~i~~~~~-----~~~~g~~~~~~i~~~~~~~ie~~~~~~~~gi~Gi~TGf~~LD~~t~Gl~~G~LiviaaRPsmGKTa 239 (471)
T PRK08006 165 VFQIAESRA-----NKDEGPKSIDDILDATVARIEQLFQQPHDGVTGVNTGYDDLNKKTAGLQPSDLIIVAARPSMGKTT 239 (471)
T ss_pred HHHHHHCCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHH
T ss_conf 999984246-----666430109999999999999997267899743668838898641688217389999469987699
Q ss_pred HHHHHHHHHHH-CCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHH-HHHHCCCEEEC
Q ss_conf 99999999630-22323641167534899999999630223234785550178899899999999999-99729954747
Q gi|254781149|r 158 FALSTALHMAM-SGHGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGICE-KLQDFPLIIDD 235 (266)
Q Consensus 158 ~alnia~~~a~-~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i~~a~~-~l~~~pl~IdD 235 (266)
T Consensus 240 lalnia~~~a~~~~~~V~~fSlEMs~~ql~~Rlla~~-----s~v~~~~i~~g~l~~~e~~~l~~~~~~~~~~~~l~idd 314 (471)
T PRK08006 240 FAMNLCENAAMLQDKPVLIFSLEMPGEQIMMRMLASL-----SRVDQTRIRTGQLDDEDWARISGTMGILLEKRNMYIDD 314 (471)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
T ss_conf 9999999999866995799816799999999999974-----47775545368879999999999999997518857736
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99889899999999999994799
Q gi|254781149|r 236 RPSPGIMEFVHVANGLRNKHTKM 258 (266)
Q Consensus 236 ~~~~ti~~ira~aR~~k~k~~~~ 258 (266)
T Consensus 315 ~~~~t~~~i~a~~r~~~~~~~gl 337 (471)
T PRK08006 315 SSGLTPTEVRSRARRIFREHGGL 337 (471)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 89998999999999999864898