HHsearch alignment for GI: 254781149 and conserved domain: PRK08472
>PRK08472 fliI flagellum-specific ATP synthase; Validated.
Probab=90.18 E-value=0.15 Score=30.93 Aligned_cols=43 Identities=21% Similarity=0.153 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 85111377777655301683688706874148899999999963
Q gi|254781149|r 124 DIKWGLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA 167 (266)
Q Consensus 124 Gi~TG~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a 167 (266)
T Consensus 141 pl~TGIraID~l~p-igrGQR~gIf~g~GvGKt~Ll~~i~~~~~ 183 (435)
T PRK08472 141 VFSVGVKSIDGLLT-CGKGQKLGIFAGSGVGKSTLMGMIVKGCL 183 (435)
T ss_pred CCCCCCEEEECCCC-CCCCCEEECCCCCCCCCCHHHHHHHHHHC
T ss_conf 41158557743266-24776651235899983357888877615