HHsearch alignment for GI: 254781149 and conserved domain: PRK08533
>PRK08533 flagellar accessory protein FlaH; Reviewed.
Probab=98.90 E-value=1.5e-08 Score=79.76 Aligned_cols=69 Identities=20% Similarity=0.338 Sum_probs=63.6
Q ss_pred CCCCHHHHHHHHH-HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 8511137777765-53016836887068741488999999999630223236411675348999999996
Q gi|254781149|r 124 DIKWGLQSVDHLM-GGVQLRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSN 192 (266)
Q Consensus 124 Gi~TG~~~LD~~~-gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~ 192 (266)
T Consensus 5 ~~~~~~d~ld~~lggGip~gs~~li~G~~GtGKsi~~~~~~~~~l~~g~~~~yis~e~t~~~~i~qm~s~ 74 (230)
T PRK08533 5 KIELDGDELHKRLGGGIPFGSIILIEGDESTGKSILSQRLAYGFLQNGYSVSYVSSQLTTTEFIKQMMSL 74 (230)
T ss_pred CEECCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHC
T ss_conf 0105713578871789889848999868998789999999999987898699999438999999999986