HHsearch alignment for GI: 254781149 and conserved domain: PRK08927
>PRK08927 fliI flagellum-specific ATP synthase; Validated.
Probab=93.84 E-value=0.086 Score=32.69 Aligned_cols=43 Identities=14% Similarity=0.180 Sum_probs=36.9
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 85111377777655301683688706874148899999999963
Q gi|254781149|r 124 DIKWGLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA 167 (266)
Q Consensus 124 Gi~TG~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a 167 (266)
T Consensus 141 ~L~TGIraID~l~p-igrGQRigIfagsGvGKs~Ll~~i~r~~~ 183 (441)
T PRK08927 141 PLDLGVRALNTFLT-CCRGQRLGIFAGSGVGKSVLLSMLARNTD 183 (441)
T ss_pred CCCCCHHHHHHHHH-HCCCCEEEECCCCCCCHHHHHHHHHHHCC
T ss_conf 31036015653300-20364666316899987899999986416