HHsearch alignment for GI: 254781149 and conserved domain: PRK09302
>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=99.30 E-value=2e-11 Score=99.96 Aligned_cols=71 Identities=23% Similarity=0.340 Sum_probs=63.7
Q ss_pred CCCCHHHHHHHHH-HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 8511137777765-530168368870687414889999999996302-23236411675348999999996302
Q gi|254781149|r 124 DIKWGLQSVDHLM-GGVQLRELILIGARPSMGKTTFALSTALHMAMS-GHGVAFFSLEMDREKLGARALSNLLY 195 (266)
Q Consensus 124 Gi~TG~~~LD~~~-gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~-g~~Vl~fSlEMs~~ql~~R~ls~~t~ 195 (266)
T Consensus 5 Ri~TGI~GLD~iL~GGlp~g~~~LV~G~pGsGKTtla~QfL~~Ga~~~GE~~lyitl~E~~~~l~~~~-~~~g~ 77 (501)
T PRK09302 5 KLPTGIEGFDDITNGGLPKGRPTLVSGTAGTGKTLFALQFLHNGIKSFGEPGVFVTFEESPEDIIRNV-ASFGW 77 (501)
T ss_pred CCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH-HHCCC
T ss_conf 21448711577854898899779998389999999999999999885599789998579999999999-98499