HHsearch alignment for GI: 254781149 and conserved domain: PRK10418
>PRK10418 nikD nickel transporter ATP-binding protein; Provisional.
Probab=90.01 E-value=1 Score=25.27 Aligned_cols=124 Identities=11% Similarity=0.091 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-----H------CC----------CCEEE-E-CCC------
Q ss_conf 377777655301683688706874148899999999963-----0------22----------32364-1-167------
Q gi|254781149|r 129 LQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-----M------SG----------HGVAF-F-SLE------ 179 (266)
Q Consensus 129 ~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-----~------~g----------~~Vl~-f-SlE------ 179 (266)
T Consensus 16 ~~vL~~Isl~v~~Ge~~aiiG~SGsGKStl~k~llgll~~~~~~~~G~i~~dg~~~~~~~~r~r~i~~v~Q~p~~~~~p~ 95 (254)
T PRK10418 16 QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLADGKPVAPCALRGRKIATIMQNPRSAFNPL 95 (254)
T ss_pred CEEEECEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEECCEEEECCEECCHHHHCCCCEEEEEECCHHHCCHH
T ss_conf 70886607289899999999999878999999995799889841578999999999603430550899983752213768
Q ss_pred CC-HHHHHH------------HHHHHHHCCCCCCCC-HHHC---CCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHH
Q ss_conf 53-489999------------999963022323478-5550---178899899999999999997299547479988989
Q gi|254781149|r 180 MD-REKLGA------------RALSNLLYPSSSRIP-YLNL---IRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIM 242 (266)
Q Consensus 180 Ms-~~ql~~------------R~ls~~t~~~~s~I~-~~~l---~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~ 242 (266)
T Consensus 96 ~~v~~~~~~~~~~~~~~~~~~~~~~~l~~---vgL~~~~~~l~~~P~qLSGGq~QRvaiArAL~~~P~lLilDEPTs~LD 172 (254)
T PRK10418 96 HTMHTHARETCLALGKPADDATLTAAIEA---VGLENAARVLKLYPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLD 172 (254)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHH---CCCCCHHHHHHHCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 89999999999865820599999999998---399986887641926348799999999999854999898558754379
Q ss_pred -----HHHHHHHHHHHHH
Q ss_conf -----9999999999994
Q gi|254781149|r 243 -----EFVHVANGLRNKH 255 (266)
Q Consensus 243 -----~ira~aR~~k~k~ 255 (266)
T Consensus 173 ~~~~~~il~ll~~l~~~~ 190 (254)
T PRK10418 173 VVAQARILDLLESIVQKR 190 (254)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999970