HHsearch alignment for GI: 254781149 and conserved domain: PRK10419
>PRK10419 nikE nickel transporter ATP-binding protein; Provisional.
Probab=92.77 E-value=0.9 Score=25.60 Aligned_cols=124 Identities=15% Similarity=0.122 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-H------CCC---------------CE-EEE-----CC--
Q ss_conf 377777655301683688706874148899999999963-0------223---------------23-641-----16--
Q gi|254781149|r 129 LQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-M------SGH---------------GV-AFF-----SL-- 178 (266)
Q Consensus 129 ~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~------~g~---------------~V-l~f-----Sl-- 178 (266)
T Consensus 25 ~~~l~~vs~~i~~GE~l~ivGeSGsGKSTL~r~i~gl~~p~sG~I~~~g~~l~~~~~~~~~~~rr~i~~VfQ~~~~slnP 104 (266)
T PRK10419 25 QAVLNNVSLTLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNISWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAVNP 104 (266)
T ss_pred EEEEECCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHCCCEEEEECCHHHCCH
T ss_conf 68885817588899899999999977999999996699999629988999567589999999754738997391363681
Q ss_pred ----------------CCCHHHHHHHHHHHHHCCCCCCCCHHHCCC--CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCC
Q ss_conf ----------------753489999999963022323478555017--88998999999999999972995474799889
Q gi|254781149|r 179 ----------------EMDREKLGARALSNLLYPSSSRIPYLNLIR--GEINQEQYRISQGICEKLQDFPLIIDDRPSPG 240 (266)
Q Consensus 179 ----------------EMs~~ql~~R~ls~~t~~~~s~I~~~~l~~--g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~t 240 (266)
T Consensus 105 ~~tv~~~i~epl~~~~~~~~~~~~~~~~~~L~~---vgL~~~~~~~yP~eLSGGq~QRVaIArAL~~~P~lLi~DEPtsa 181 (266)
T PRK10419 105 RKTVREILREPLRHLLSLDKAERLARASEMLKA---VDLDDSVLDKRPPQLSGGQLQRVCLARALAVEPKLLILDEAVSN 181 (266)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH---CCCCHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf 648999999999981499999999999999987---49988987178433792787778986664069878999688653
Q ss_pred HH-----HHHHHHHHHHHHH
Q ss_conf 89-----9999999999994
Q gi|254781149|r 241 IM-----EFVHVANGLRNKH 255 (266)
Q Consensus 241 i~-----~ira~aR~~k~k~ 255 (266)
T Consensus 182 LD~~~q~~il~ll~~l~~~~ 201 (266)
T PRK10419 182 LDLVLQAGVIRLLKKLQQQF 201 (266)
T ss_pred CCHHHHHHHHHHHHHHHHHH
T ss_conf 69999999999999999975