HHsearch alignment for GI: 254781149 and conserved domain: PRK10762
>PRK10762 D-ribose transporter ATP binding protein; Provisional.
Probab=92.79 E-value=0.89 Score=25.63 Aligned_cols=122 Identities=16% Similarity=0.157 Sum_probs=67.8
Q ss_pred HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH-HH------CCCC-------------EEEEC---------CCCC
Q ss_conf 777765530168368870687414889999999996-30------2232-------------36411---------6753
Q gi|254781149|r 131 SVDHLMGGVQLRELILIGARPSMGKTTFALSTALHM-AM------SGHG-------------VAFFS---------LEMD 181 (266)
Q Consensus 131 ~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~-a~------~g~~-------------Vl~fS---------lEMs 181 (266)
T Consensus 267 ~l~~vs~~v~~GEi~gi~G~nGsGKsTL~~~l~Gl~~~~~G~v~~~G~~i~~~~~~~~~~~~i~~v~~dr~~~~l~~~~s 346 (501)
T PRK10762 267 GVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMS 346 (501)
T ss_pred CCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCCCEECHHHHHCCCCCCCC
T ss_conf 65634447668818996678887688999998187677777699999988877989998617844512333147667880
Q ss_pred HHHHH-HHH---HHHHH--------------CCCCCCCCHHHCC--CCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCH
Q ss_conf 48999-999---99630--------------2232347855501--7889989999999999999729954747998898
Q gi|254781149|r 182 REKLG-ARA---LSNLL--------------YPSSSRIPYLNLI--RGEINQEQYRISQGICEKLQDFPLIIDDRPSPGI 241 (266)
Q Consensus 182 ~~ql~-~R~---ls~~t--------------~~~~s~I~~~~l~--~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti 241 (266)
T Consensus 347 v~en~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSGGq~Qrv~iAraL~~~p~lLilDEPT~GL 426 (501)
T PRK10762 347 VKENMSLTALDYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGV 426 (501)
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 99988788788653301325789999999999975288630011770209999999999999997299889997986689
Q ss_pred H-----HHHHHHHHHH
Q ss_conf 9-----9999999999
Q gi|254781149|r 242 M-----EFVHVANGLR 252 (266)
Q Consensus 242 ~-----~ira~aR~~k 252 (266)
T Consensus 427 D~~~~~~i~~ll~~l~ 442 (501)
T PRK10762 427 DVGAKKEIYQLINQFK 442 (501)
T ss_pred CHHHHHHHHHHHHHHH
T ss_conf 9999999999999999