HHsearch alignment for GI: 254781149 and conserved domain: PRK11034
>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional.
Probab=95.70 E-value=0.21 Score=29.96 Aligned_cols=55 Identities=15% Similarity=0.217 Sum_probs=39.3
Q ss_pred HHHHHHHHHHH--CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCC-----EEEECCCCCHH
Q ss_conf 37777765530--168368870687414889999999996302232-----36411675348
Q gi|254781149|r 129 LQSVDHLMGGV--QLRELILIGARPSMGKTTFALSTALHMAMSGHG-----VAFFSLEMDRE 183 (266)
Q Consensus 129 ~~~LD~~~gG~--~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~-----Vl~fSlEMs~~ 183 (266)
T Consensus 192 ~~Ei~r~i~iL~Rr~KNNpiLvGepGVGKTAIvEGLA~rI~~g~VP~~L~~~~i~~Ldl~~L 253 (758)
T PRK11034 192 EKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL 253 (758)
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHH
T ss_conf 89999999999763258960216999869999999999997389976558988998458778