HHsearch alignment for GI: 254781149 and conserved domain: PRK11288
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional.
Probab=94.84 E-value=0.22 Score=29.84 Aligned_cols=99 Identities=13% Similarity=0.070 Sum_probs=57.5
Q ss_pred HHCCCCEEEEECCCCHHHHHHHHHHHHHH-HH------CCCCE------------EEECC----------CCCH-HHH--
Q ss_conf 30168368870687414889999999996-30------22323------------64116----------7534-899--
Q gi|254781149|r 138 GVQLRELILIGARPSMGKTTFALSTALHM-AM------SGHGV------------AFFSL----------EMDR-EKL-- 185 (266)
Q Consensus 138 G~~~g~LiviaaRP~mGKTa~alnia~~~-a~------~g~~V------------l~fSl----------EMs~-~ql-- 185 (266)
T Consensus 275 ~v~~GEivgivG~nGsGKSTL~k~L~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~gi~~vp~dr~~~~l~~~~sv~enl~~ 354 (501)
T PRK11288 275 AVRRGEIVGFFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPVDIRSPRDAIRAGIMLCPEDRKAEGIIPVASVADNINI 354 (501)
T ss_pred EEECCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCEECCCCCHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 87088399975688864879999843874887665999999888779789986177860120000255778829999986
Q ss_pred ---------------------HHHHHHHHHCCCCCCCCHHHCCC--CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHH
Q ss_conf ---------------------99999963022323478555017--8899899999999999997299547479988989
Q gi|254781149|r 186 ---------------------GARALSNLLYPSSSRIPYLNLIR--GEINQEQYRISQGICEKLQDFPLIIDDRPSPGIM 242 (266)
Q Consensus 186 ---------------------~~R~ls~~t~~~~s~I~~~~l~~--g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~ 242 (266)
T Consensus 355 ~~~~~~~~~g~~~~~~~~~~~~~~~l~~------l~~~~~~~~~~~~~LSGGq~QRvaiAraL~~~p~vLilDEPT~GLD 428 (501)
T PRK11288 355 SARRHHLRAGCLINNKWEAENADRFIRS------LNIKTPSREQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGID 428 (501)
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHH------CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 7654035211001659999999999987------5897654437500289999999999999970999899979877899