HHsearch alignment for GI: 254781149 and conserved domain: PRK11308
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional.
Probab=94.90 E-value=0.25 Score=29.44 Aligned_cols=111 Identities=13% Similarity=0.121 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH-------CCCC---------------E-EEE-C-------
Q ss_conf 3777776553016836887068741488999999999630-------2232---------------3-641-1-------
Q gi|254781149|r 129 LQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAM-------SGHG---------------V-AFF-S------- 177 (266)
Q Consensus 129 ~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~-------~g~~---------------V-l~f-S------- 177 (266)
T Consensus 28 v~Av~~Vsl~i~~GE~lgiVGeSGsGKSTL~~~l~gl~~p~~G~I~~~G~dl~~~~~~~~~~~r~~i~~VfQ~p~~sLnP 107 (327)
T PRK11308 28 VKALDGVSFNLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADPEAQKLLRRKVQIVFQNPYGSLNP 107 (327)
T ss_pred EEEECCEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHHCCEEEEEECCHHHCCH
T ss_conf 88850606798899999999998319999999995699988637998999557799999999755779998686343380
Q ss_pred ---------------CCCCHHHHHHHHHHHHHCCCCCCCCHHHCC--CCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCC
Q ss_conf ---------------675348999999996302232347855501--788998999999999999972995474799889
Q gi|254781149|r 178 ---------------LEMDREKLGARALSNLLYPSSSRIPYLNLI--RGEINQEQYRISQGICEKLQDFPLIIDDRPSPG 240 (266)
Q Consensus 178 ---------------lEMs~~ql~~R~ls~~t~~~~s~I~~~~l~--~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~t 240 (266)
T Consensus 108 ~~~v~~~l~e~l~~~~~~~~~~~~~~~~~~L~~v---gL~~~~~~ryP~eLSGGq~QRv~IArAL~~~P~lLi~DEPTsa 184 (327)
T PRK11308 108 RKKVGQILEEPLLINTSLSAAERREKALAMMAKV---GLRPEHYDRYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSA 184 (327)
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC---CCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 3424343357788614899999999999999870---4566566457644799999999999998428989998478654
Q ss_pred HH
Q ss_conf 89
Q gi|254781149|r 241 IM 242 (266)
Q Consensus 241 i~ 242 (266)
T Consensus 185 LD 186 (327)
T PRK11308 185 LD 186 (327)
T ss_pred CC
T ss_conf 69