HHsearch alignment for GI: 254781149 and conserved domain: PRK11607
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional.
Probab=94.80 E-value=0.19 Score=30.32 Aligned_cols=125 Identities=14% Similarity=0.130 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-H------CCCC----------EEE---------------
Q ss_conf 1377777655301683688706874148899999999963-0------2232----------364---------------
Q gi|254781149|r 128 GLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-M------SGHG----------VAF--------------- 175 (266)
Q Consensus 128 G~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~------~g~~----------Vl~--------------- 175 (266)
T Consensus 31 ~~~al~~vsl~I~~GE~~~llGpsGsGKSTllr~i~Gl~~p~~G~I~i~G~di~~~~~~~r~ig~vfQ~~~L~p~ltV~e 110 (377)
T PRK11607 31 GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVEQ 110 (377)
T ss_pred CEEEECCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCEECCCCCHHHCCEEEEECCCCCCCCCCHHH
T ss_conf 99999051879999989999999984899999999769999865999999998879866665046701265587757545
Q ss_pred ---ECC---CCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHH-----HH
Q ss_conf ---116---7534899999999630223234785550178899899999999999997299547479988989-----99
Q gi|254781149|r 176 ---FSL---EMDREKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIM-----EF 244 (266)
Q Consensus 176 ---fSl---EMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~-----~i 244 (266)
T Consensus 111 Ni~~~l~~~~~~~~e~~~rv~e~l~~v~L~~--~~~~~p~~LSGGqrQRVaiArAL~~~P~lLllDEPts~LD~~~r~~l 188 (377)
T PRK11607 111 NIAFGLKQDKLPKAEIASRVNEMLGLVHMQE--FAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRM 188 (377)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHCCCCHH--HHHCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH
T ss_conf 2454786659998999999999985446276--66589657898687899999987449978996487544799999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254781149|r 245 VHVANGLRNK 254 (266)
Q Consensus 245 ra~aR~~k~k 254 (266)
T Consensus 189 ~~~l~~l~~~ 198 (377)
T PRK11607 189 QLEVVDILER 198 (377)
T ss_pred HHHHHHHHHH
T ss_conf 9999999997