HHsearch alignment for GI: 254781149 and conserved domain: PRK11614
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional.
Probab=93.23 E-value=0.28 Score=29.08 Aligned_cols=119 Identities=18% Similarity=0.155 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH-C------CC-------------CEEEEC------CCCCH
Q ss_conf 3777776553016836887068741488999999999630-2------23-------------236411------67534
Q gi|254781149|r 129 LQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAM-S------GH-------------GVAFFS------LEMDR 182 (266)
Q Consensus 129 ~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~-~------g~-------------~Vl~fS------lEMs~ 182 (266)
T Consensus 18 ~~~L~~isl~i~~Gei~~liG~NGaGKSTLl~~i~G~~~~~~G~I~~~G~~i~~~~~~~~~r~~i~~vpq~~~~~~~ltv 97 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTV 97 (237)
T ss_pred EEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHCEEEECCCCCCCCCCCH
T ss_conf 88881127898699799998799975999999996799889628999999888799899987064783556645777889
Q ss_pred HHHH----------------HHHHHHHHCCCCCCCCHH-HCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCH----
Q ss_conf 8999----------------999996302232347855-5017889989999999999999729954747998898----
Q gi|254781149|r 183 EKLG----------------ARALSNLLYPSSSRIPYL-NLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGI---- 241 (266)
Q Consensus 183 ~ql~----------------~R~ls~~t~~~~s~I~~~-~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti---- 241 (266)
T Consensus 98 ~enl~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~~~~~~~~LSgG~~Qrv~iAraL~~~P~lLlLDEPt~gLD~~~ 172 (237)
T PRK11614 98 EENLAMGGFFAERDQFQERIKWVYELF-----PRLHERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPII 172 (237)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHH-----HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
T ss_conf 999875101378678999999999865-----555676544223489988599999999856999999959755799999
Q ss_pred -HHHHHHHHHHH
Q ss_conf -99999999999
Q gi|254781149|r 242 -MEFVHVANGLR 252 (266)
Q Consensus 242 -~~ira~aR~~k 252 (266)
T Consensus 173 ~~~i~~~l~~l~ 184 (237)
T PRK11614 173 IQQIFDTIEQLR 184 (237)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999