HHsearch alignment for GI: 254781149 and conserved domain: PRK11629
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional.
Probab=94.33 E-value=0.5 Score=27.37 Aligned_cols=111 Identities=14% Similarity=0.137 Sum_probs=66.3
Q ss_pred HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH-C------C----------------CCEEE-EC-----CCCC
Q ss_conf 77776553016836887068741488999999999630-2------2----------------32364-11-----6753
Q gi|254781149|r 131 SVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAM-S------G----------------HGVAF-FS-----LEMD 181 (266)
Q Consensus 131 ~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~-~------g----------------~~Vl~-fS-----lEMs 181 (266)
T Consensus 24 ~l~~vs~~i~~GE~v~iiG~sGsGKSTLl~~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~r~~~ig~v~Q~~~l~~~~t 103 (233)
T PRK11629 24 VLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFT 103 (233)
T ss_pred EEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHCCCEEEECCCCCCCCCCC
T ss_conf 98462899889989999999994099999999669999863999999998869988999873797899916752377866
Q ss_pred ---------------HHHHHHHHHHHHHCCCCCCCCHHH-CCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHH
Q ss_conf ---------------489999999963022323478555-017889989999999999999729954747998898999
Q gi|254781149|r 182 ---------------REKLGARALSNLLYPSSSRIPYLN-LIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIMEF 244 (266)
Q Consensus 182 ---------------~~ql~~R~ls~~t~~~~s~I~~~~-l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~~i 244 (266)
T Consensus 104 v~eni~~~l~~~~~~~~~~~~~~~~~l~~~---gl~~~~~~~~~~LSGGqkQRvaiAraL~~~P~illlDEPTs~LD~~ 179 (233)
T PRK11629 104 ALENVAMPLLIGKKKPAEINSRALEMLKAV---GLEHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDAR 179 (233)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHC---CCHHHHHCCCCEECHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH
T ss_conf 999998899984999999999899999872---7366774984663899999999999996599999992888879999