HHsearch alignment for GI: 254781149 and conserved domain: PRK11819

Probab=93.71  E-value=0.22  Score=29.82  Aligned_cols=114  Identities=12%  Similarity=0.049  Sum_probs=69.8

Q ss_pred             HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-HCC-----C--CEEEECCC-------CCHH-------------
Q ss_conf             777655301683688706874148899999999963-022-----3--23641167-------5348-------------
Q gi|254781149|r  132 VDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-MSG-----H--GVAFFSLE-------MDRE-------------  183 (266)
Q Consensus       132 LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~~g-----~--~Vl~fSlE-------Ms~~-------------  183 (266)
T Consensus       340 l~~vs~~i~~Ge~iaivG~NGsGKSTLlk~l~G~~~p~~G~i~~g~~v~igy~~Q~~~~l~~~~tv~e~v~~~~~~~~~~  419 (556)
T PRK11819        340 IDDLSFKLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGETVKLAYVDQSRDALDPNKTVWEEISGGLDIIKVG  419 (556)
T ss_pred             EEEECCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHCHHHHHHHH
T ss_conf             87640235788247898898775889999983865688855998996650322120542697684999874526665421


Q ss_pred             --HHHHH-HHHHHHCCCCCCCCHHHCC--CCCCCHHHHHHHHHHHHHHHHCCCEEECCCC--CCHHHHHHHHHHH
Q ss_conf             --99999-9996302232347855501--7889989999999999999729954747998--8989999999999
Q gi|254781149|r  184 --KLGAR-ALSNLLYPSSSRIPYLNLI--RGEINQEQYRISQGICEKLQDFPLIIDDRPS--PGIMEFVHVANGL  251 (266)
Q Consensus       184 --ql~~R-~ls~~t~~~~s~I~~~~l~--~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~--~ti~~ira~aR~~  251 (266)
T Consensus       420 ~~e~~~r~~L~~------f~~~~~~~~~~v~~LSGGek~Rv~lA~~l~~~p~lLiLDEPTn~LDi~s~e~Le~aL  488 (556)
T PRK11819        420 NREIPSRAYVGR------FNFKGGDQQKKVGVLSGGERNRLHLAKTLKSGGNVLLLDEPTNDLDVETLRALEDAL  488 (556)
T ss_pred             HHHHHHHHHHHH------HCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
T ss_conf             677899999987------078724551970318899999999999996298989992977567999999999999