HHsearch alignment for GI: 254781149 and conserved domain: PRK11831
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional.
Probab=93.59 E-value=0.68 Score=26.44 Aligned_cols=123 Identities=17% Similarity=0.087 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEC----------------------------CCC
Q ss_conf 3777776553016836887068741488999999999630223236411----------------------------675
Q gi|254781149|r 129 LQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFS----------------------------LEM 180 (266)
Q Consensus 129 ~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fS----------------------------lEM 180 (266)
T Consensus 21 ~~vL~~is~~i~~Gei~~iiGpnGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~l~~~l 100 (269)
T PRK11831 21 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDM 100 (269)
T ss_pred EEEEECCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHHHCEEEECCCCCCCCCC
T ss_conf 89994716688799899999399975999999996798889866999998887658878998761468985376326788
Q ss_pred CHHHHH----------------HHHHHHHHCCCCCCCC-HHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHH-
Q ss_conf 348999----------------9999963022323478-5550178899899999999999997299547479988989-
Q gi|254781149|r 181 DREKLG----------------ARALSNLLYPSSSRIP-YLNLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIM- 242 (266)
Q Consensus 181 s~~ql~----------------~R~ls~~t~~~~s~I~-~~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~- 242 (266)
T Consensus 101 tv~eni~~~l~~~~~~~~~~~~~~v~~~Le~~---gL~~~~~~~~~~LSGGq~QRv~iAraL~~~P~iLlLDEPtsgLD~ 177 (269)
T PRK11831 101 NVFDNVAYPLREHTQLPAPLLHSTVMMKLEAV---GLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDP 177 (269)
T ss_pred CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC---CCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCH
T ss_conf 59999989999955899999999999999861---765456388231899999999999999759999998287567999
Q ss_pred ----HHHHHHHHHHHH
Q ss_conf ----999999999999
Q gi|254781149|r 243 ----EFVHVANGLRNK 254 (266)
Q Consensus 243 ----~ira~aR~~k~k 254 (266)
T Consensus 178 ~~~~~i~~li~~l~~~ 193 (269)
T PRK11831 178 ITMGVLVKLISELNSA 193 (269)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999985