HHsearch alignment for GI: 254781149 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=91.56 E-value=1.2 Score=24.64 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=69.7
Q ss_pred HHHHHHH-HHCCCCEEEEECCCCHHHHHHHHHHHHHHH---HC-C---CCEEEECCCC--CHHHHHHHHHHHH-HCCCCC
Q ss_conf 7777655-301683688706874148899999999963---02-2---3236411675--3489999999963-022323
Q gi|254781149|r 131 SVDHLMG-GVQLRELILIGARPSMGKTTFALSTALHMA---MS-G---HGVAFFSLEM--DREKLGARALSNL-LYPSSS 199 (266)
Q Consensus 131 ~LD~~~g-G~~~g~LiviaaRP~mGKTa~alnia~~~a---~~-g---~~Vl~fSlEM--s~~ql~~R~ls~~-t~~~~s 199 (266)
T Consensus 32 ~L~~~l~PG~~P~Ni-~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~NC~~~~T~y~~~~~L~~~ln~~~~~~ 110 (383)
T TIGR02928 32 ALRPILRPGSRPSNI-FIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYINCQILDTSYQVLVELANQLNRRGSGE 110 (383)
T ss_pred HHHHHHCCCCCCCCE-EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 988750674898725-8878889878899999999999986226997158999778546846999999999851577888
Q ss_pred CCCHHHCCCCCCCHHHHHHHHHHHH-HHHHCCCEEECC
Q ss_conf 4785550178899899999999999-997299547479
Q gi|254781149|r 200 RIPYLNLIRGEINQEQYRISQGICE-KLQDFPLIIDDR 236 (266)
Q Consensus 200 ~I~~~~l~~g~l~~~e~~~i~~a~~-~l~~~pl~IdD~ 236 (266)
T Consensus 111 ~vP~t----G~s~~~~~~~l~~~l~~~~~~~~~ivLDE 144 (383)
T TIGR02928 111 EVPTT----GLSTSEVFRELYKELNRERGDSLIIVLDE 144 (383)
T ss_pred CCCCC----CCCHHHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 89887----78789999999999832018879998623