HHsearch alignment for GI: 254781149 and conserved domain: TIGR03345
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system.
Probab=96.52 E-value=0.087 Score=32.66 Aligned_cols=55 Identities=16% Similarity=0.236 Sum_probs=39.6
Q ss_pred HHHHHHHHHHH--CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCC-----EEEECCCCCHH
Q ss_conf 37777765530--168368870687414889999999996302232-----36411675348
Q gi|254781149|r 129 LQSVDHLMGGV--QLRELILIGARPSMGKTTFALSTALHMAMSGHG-----VAFFSLEMDRE 183 (266)
Q Consensus 129 ~~~LD~~~gG~--~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~-----Vl~fSlEMs~~ 183 (266)
T Consensus 193 d~EI~r~iqIL~Rr~KNNPiLVGepGVGKTAIvEGLA~rI~~g~VP~~L~~~~i~sLDlg~L 254 (852)
T TIGR03345 193 DDEIRQMIDILLRRRQNNPILTGEAGVGKTAVVEGLALRIAAGDVPPALRNVRLLSLDLGLL 254 (852)
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCCEEEEEEHHHH
T ss_conf 99999999999862479974657999879999999999997699986774385678678888