HHsearch alignment for GI: 254781149 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=96.25 E-value=0.041 Score=34.93 Aligned_cols=40 Identities=23% Similarity=0.262 Sum_probs=33.4
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 6836887068741488999999999630223236411675
Q gi|254781149|r 141 LRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEM 180 (266)
Q Consensus 141 ~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEM 180 (266)
T Consensus 18 ~~~~ill~GppGtGKT~la~~ia~~~~~~~~~~~~~~~~~ 57 (151)
T cd00009 18 PPKNLLLYGPPGTGKTTLARAIANELFRPGAPFLYLNASD 57 (151)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHH
T ss_conf 9980899899998865999999997121379827854777