HHsearch alignment for GI: 254781149 and conserved domain: cd01131

>cd01131 PilT Pilus retraction ATPase PilT. PilT is a nucleotide binding protein responsible for the retraction of type IV pili, likely by pili disassembly. This retraction provides the force required for travel of bacteria in low water environments by a mechanism known as twitching motility.

Probab=92.04  E-value=0.24  Score=29.60  Aligned_cols=40  Identities=18%  Similarity=0.152  Sum_probs=23.1

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHH
Q ss_conf             68870687414889999999996302232364116753489
Q gi|254781149|r  144 LILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREK  184 (266)
Q Consensus       144 LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~q  184 (266)
T Consensus         3 liLitG~TGSGKTTtl~all~~i~~~-~~~~IiTiEDPiE~   42 (198)
T cd01131           3 LVLVTGPTGSGKSTTLAAMIDYINKN-KTHHILTIEDPIEF   42 (198)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCC-CCCEEEEECCCHHH
T ss_conf             89998999997999999999853637-88369996473775