HHsearch alignment for GI: 254781149 and conserved domain: cd03217
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=95.01 E-value=0.031 Score=35.82 Aligned_cols=114 Identities=13% Similarity=0.100 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-H-CCCCEEEEC---CCCCHHHHHHHHHHHHHC--CCCCCC
Q ss_conf 377777655301683688706874148899999999963-0-223236411---675348999999996302--232347
Q gi|254781149|r 129 LQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-M-SGHGVAFFS---LEMDREKLGARALSNLLY--PSSSRI 201 (266)
Q Consensus 129 ~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~-~g~~Vl~fS---lEMs~~ql~~R~ls~~t~--~~~s~I 201 (266)
T Consensus 13 ~~vL~~vsl~v~~Gei~~iiGpnGaGKSTLl~~i~G~~~~~~~~G~I~~~g~~i~~~~~~~~~~~gi~~~~q~~~~~~~~ 92 (200)
T cd03217 13 KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLGIFLAFQYPPEIPGV 92 (200)
T ss_pred EEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCEECCCCCHHHHHHCCEEEECCCHHHCCCC
T ss_conf 99885505688799899999689999999999970777778520079999999886999999976948963676870798
Q ss_pred CHHHC-C--CCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHH
Q ss_conf 85550-1--78899899999999999997299547479988989
Q gi|254781149|r 202 PYLNL-I--RGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIM 242 (266)
Q Consensus 202 ~~~~l-~--~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~ 242 (266)
T Consensus 93 ~~~~~l~~~~~~LSGGekqrv~iaral~~~P~lllLDEPtsgLD 136 (200)
T cd03217 93 KNADFLRYVNEGFSGGEKKRNEILQLLLLEPDLAILDEPDSGLD 136 (200)
T ss_pred CHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 49999976463679999999999999960999999969622699