HHsearch alignment for GI: 254781149 and conserved domain: cd03225

>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=90.10  E-value=1.7  Score=23.75  Aligned_cols=121  Identities=17%  Similarity=0.151  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH-HHCC------C------------CEEEEC-------CCC---
Q ss_conf             7777765530168368870687414889999999996-3022------3------------236411-------675---
Q gi|254781149|r  130 QSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHM-AMSG------H------------GVAFFS-------LEM---  180 (266)
Q Consensus       130 ~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~-a~~g------~------------~Vl~fS-------lEM---  180 (266)
T Consensus        15 ~~L~~vsl~i~~Gei~~iiG~nGaGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ig~v~Q~p~~~~~~~tv~   94 (211)
T cd03225          15 PALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGPTVE   94 (211)
T ss_pred             EEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEECCEECCCCCHHHHHCCEEEEEECCHHHCCCCCHH
T ss_conf             57753178884997999988999989999999964677988877899999997998998403899977832530558699


Q ss_pred             ------------CHHHHHHHHHHHHHCCCCCCCCH-HHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHH-----
Q ss_conf             ------------34899999999630223234785-550178899899999999999997299547479988989-----
Q gi|254781149|r  181 ------------DREKLGARALSNLLYPSSSRIPY-LNLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIM-----  242 (266)
Q Consensus       181 ------------s~~ql~~R~ls~~t~~~~s~I~~-~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~-----  242 (266)
T Consensus        95 e~i~~~~~~~~~~~~~~~~~~~~~l~~---~~l~~~~~~~~~~LSGGqkQrv~iAral~~~P~ililDEPTsgLD~~~~~  171 (211)
T cd03225          95 EEVAFGLENLGLPEEEIEERVEEALEL---VGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRR  171 (211)
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHH---CCCHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH
T ss_conf             999999998699999999999999998---69946663895459998999999999997599999997985558999999


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999999
Q gi|254781149|r  243 EFVHVANGLRN  253 (266)
Q Consensus       243 ~ira~aR~~k~  253 (266)
T Consensus       172 ~i~~~l~~l~~  182 (211)
T cd03225         172 ELLELLKKLKA  182 (211)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999997