HHsearch alignment for GI: 254781149 and conserved domain: cd03234

>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=94.35  E-value=0.15  Score=30.99  Aligned_cols=124  Identities=16%  Similarity=0.128  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH----HCCCCEEEECC----------------------CCCH
Q ss_conf             377777655301683688706874148899999999963----02232364116----------------------7534
Q gi|254781149|r  129 LQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA----MSGHGVAFFSL----------------------EMDR  182 (266)
Q Consensus       129 ~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a----~~g~~Vl~fSl----------------------EMs~  182 (266)
T Consensus        20 ~~vL~~vs~~i~~Ge~~~ilGpnGsGKSTLl~~i~G~~~~~~~~~G-~I~~~g~~~~~~~~~~~igyv~Q~~~l~~~lTv   98 (226)
T cd03234          20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSG-QILFNGQPRKPDQFQKCVAYVRQDDILLPGLTV   98 (226)
T ss_pred             EEEEECCEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEE-EEEECCEECCHHHHHHCEEEECCCCCCCCCCCH
T ss_conf             8998897789918809999989996099999999678978984145-999999999878975018999166756789889


Q ss_pred             HHHHHHHHHHHHC---------------CCCCCCCHHHCC---CCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHH--
Q ss_conf             8999999996302---------------232347855501---78899899999999999997299547479988989--
Q gi|254781149|r  183 EKLGARALSNLLY---------------PSSSRIPYLNLI---RGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIM--  242 (266)
Q Consensus       183 ~ql~~R~ls~~t~---------------~~~s~I~~~~l~---~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~--  242 (266)
T Consensus        99 ~e~l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSGGqrqRv~iA~aL~~~P~illLDEPTsgLD~~  177 (226)
T cd03234          99 RETLT-YTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSF  177 (226)
T ss_pred             HHHHH-HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH
T ss_conf             99999-99974676436278999999999998758976746773328999999999999996599989995886568999


Q ss_pred             ---HHHHHHHHHHHH
Q ss_conf             ---999999999999
Q gi|254781149|r  243 ---EFVHVANGLRNK  254 (266)
Q Consensus       243 ---~ira~aR~~k~k  254 (266)
T Consensus       178 ~~~~i~~~l~~l~~~  192 (226)
T cd03234         178 TALNLVSTLSQLARR  192 (226)
T ss_pred             HHHHHHHHHHHHHHC
T ss_conf             999999999999978